Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869682.1_cds_XP_016433830.1_29950
CDS Infomation

[gene=LOC107760311] [db_xref=GeneID:107760311] [protein=serine/threonine-protein kinase/endoribonuclease IRE1a-like] [protein_id=XP_016433830.1] [location=join(34187..34347,35800..36034,37506..38893,39799..39971,40304..40550,41527..41830,42288..42434)] [gbkey=CDS]
Sequence

ATGAAACGGCACTGGGTGATCCTGGTCTGTATTTTGCTGTTATTTTTTGGCTTTACGGGC
TTGGCGAGTGAGTTATTGAGCTTGCCCAGTAGTTCAATTGAGGGAATTTCCGATGAGGTT
ACGCTAGCTCCGGCGAGGAGGAATCTGTTGTCAGAGTTGAGGAAACCTGAGACAGCACTG
GTTGCTGAACTGGATGGTACTGTTCATTTACGGGAGGTTAAAACTGAGAAAACACTCTGG
TCATTTAGATCTGGCCCATCAATCTACTCTTCTTATCAGGCTCCTATAAACTATAATGAC
AACAGGGAGGCATCATCTGATATAGGAAGTGGTTATTTCATTGACTGCCGTGGGGATGAT
TGGGAATTGTATGCGCACAACAGGCTTGGCAAATTGAAACTTATGAAAAATATTGATGAG
TATATTAGTTCAACTCCACAAATAGCTGAGGATGGCGGGATTGTTCTGGGATCTAAAAGA
ACTACTGCATTTCTGGTTGATGCTAAGACTGGTCGCCTGATTTATACATATAGGATGCCT
GACTCTCCAGCAACTCACGACAATGGCATTGCCTTTCATCATAATGGTACCATTGATGAA
GAGAGTCTGCCCACATACACGCTTTACATCACCAGAACAGACTATGCATTGACATCTTTT
ATTCCAAACTCAGACCAAGTGTTGTGGAACATGACGGTTGCTGAAATAGGGGCTGCTTCT
CTTTGCAAAGACATCGAGGATCCATTTAGTGGGGATATTCTGGATTCTGAAAGATCTGAA
CCTGACGTACATTTCGATATGCCATTGCCATGTCAGTCAAGGGCCCTTATCCACAGACGT
CGAAGTCAGCAGGAGAAGATGCTCCCGGGTGCTCATCGTCCAGAGCTCCCCTCATCAGAG
CCAAATGTTGATAATGCAGCTAATGCAGACACATCCCATTTGGAATATTTTATAAAAAGG
ACTATGTTTGGCATATTGGTGGTGCTCATACTTTTAATCATCAAAAAGAAAAATTCCGAA
GATGTTAAAAAGCCATTTAAAGAAGGAATAATCAAGTCTTCTGAAAGATTGAGCATGCCA
GTTCGCAATATTTTAGCCACTCTTGTGGGAGCTTTAACACGCAATCGTTATTCAGGGGCT
GAAGTCAAGTTGGTTAGACAGCCCGGCAACTCACATTCACCAAATGTACCTTCAAAAAGG
AAAAAGTCTCGGAAGTCTGGAAAGAATGGGAGCAATGGTGAGAAAAGTGATAAAGGCCCC
TCATCTGATGGTGGACTTCAATATGCAGACGTGGATGCTGATAATAAACTGTTGCTGAAC
CTTATTCAACCAAGTATATGTGGCAAAGGTGGACGCACTATCGGTAAGTTGTTTGTCTCC
AGTACAGAGATTGCTAAAGGGAGCAATGGCACAGTTGTCCTTGAAGGAATTTATGAAGGT
CGTGCAGTTGCTGTGAAAAGACTTGTCCGGGCACATTATGATATCGCCTTCAAAGAGATA
AAGAATCTTATTGCATCTGATCGACATCCAAATATTGTTCGGTGGTATGGTGTGGAACAA
GACCAAGATTTTGTTTATCTTGCACTGGAACGCTGCATTTGCAGCTTGAGTGACCTTATT
CAGATTTATGCCGACACTACAGTAAATGCACGTCTTAACCAGAACTTGGATGCAGAATCT
ACTAACCGTAGAATTCATTTGGATTATTTGAACGGTATTATGTTGGATACTGAGTTAAGG
AAAGAAAATGGTTTTCCTTCACCTTTGTTGCTCAAATTGATGAGGGATGTGGTCTCTGGT
CTTGTGCATCTTCATGATTTGGGGATCATTCATCGAGACCTGAAGCCCCCAAATGTTCTG
ATAACTAAGGAAAGATTCTTAGGTGCTAAGCTTTCTGATATGGGAATTAGCAAGCGCCTC
ATCGGAGATATGTCTTCATTGGGTCATCACGCGACAGGTTATGGAAGTTCGGGTTGGCAA
GCTCCTGAACAGCTTCTTCATGGACGTCAAACACGCGCTGTTGATATGTTCAGTCTGGGG
TGTGTTCTGTTTTTCTGCGTGACTGATGGTAGTCATCCCTTTGGAAGCCCTCTTGAGCGT
GACATTAACATTACAAAGAACAAAATTGATCTTTTCTTGGTGGAACACATCCCTGAAGCT
GTGGATCTCTTTTCTCATTTATTAGACCCCAATGCTGAGTTGAGACCGAAGGCTGTGGAC
GTGCTTGCTCATCCTTTCTTTTGGACATCTGAGATACGATTGTCATTTCTTCGTGACTCA
AGCGACAGGGTGGAACTCGAAGACAGGGAGACTTCTTCTGATCTCCTGAAAGCATTGGAA
GGTACAGCACCAGTTGCTTTGGGTGGAAAATGGGATGAGAAGATGGAATCTCCGTTCATC
AACAATATTGGTCGTTACAGGCGATATAAGTTCGACAGTGTTCGTGATTTGCTGCGAGTC
ATGCGCAACAAGCTAAATCATTACAGAGAGCTTCCCACCGAAATTCAGGAAATTTTAGGA
ACTGTACCAGAAGGATTTGATGGCTATTTTAAGAGTCGGTTTCCCAAATTACTAATTGAA
GTGTATAAAGTGATGTCAGATTACTGTAGGAATGAAGACTGTTTCCAGAAGTACTTCACA
AGCAGTGTACTCTAA

Peptide Sequence

PEP ID

XP_016433830.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1a-like [Nicotiana tabacum]
Sequence

MKRHWVILVCILLLFFGFTGLASELLSLPSSSIEGISDEVTLAPARRNLLSELRKPETAL
VAELDGTVHLREVKTEKTLWSFRSGPSIYSSYQAPINYNDNREASSDIGSGYFIDCRGDD
WELYAHNRLGKLKLMKNIDEYISSTPQIAEDGGIVLGSKRTTAFLVDAKTGRLIYTYRMP
DSPATHDNGIAFHHNGTIDEESLPTYTLYITRTDYALTSFIPNSDQVLWNMTVAEIGAAS
LCKDIEDPFSGDILDSERSEPDVHFDMPLPCQSRALIHRRRSQQEKMLPGAHRPELPSSE
PNVDNAANADTSHLEYFIKRTMFGILVVLILLIIKKKNSEDVKKPFKEGIIKSSERLSMP
VRNILATLVGALTRNRYSGAEVKLVRQPGNSHSPNVPSKRKKSRKSGKNGSNGEKSDKGP
SSDGGLQYADVDADNKLLLNLIQPSICGKGGRTIGKLFVSSTEIAKGSNGTVVLEGIYEG
RAVAVKRLVRAHYDIAFKEIKNLIASDRHPNIVRWYGVEQDQDFVYLALERCICSLSDLI
QIYADTTVNARLNQNLDAESTNRRIHLDYLNGIMLDTELRKENGFPSPLLLKLMRDVVSG
LVHLHDLGIIHRDLKPPNVLITKERFLGAKLSDMGISKRLIGDMSSLGHHATGYGSSGWQ
APEQLLHGRQTRAVDMFSLGCVLFFCVTDGSHPFGSPLERDINITKNKIDLFLVEHIPEA
VDLFSHLLDPNAELRPKAVDVLAHPFFWTSEIRLSFLRDSSDRVELEDRETSSDLLKALE
GTAPVALGGKWDEKMESPFINNIGRYRRYKFDSVRDLLRVMRNKLNHYRELPTEIQEILG
TVPEGFDGYFKSRFPKLLIEVYKVMSDYCRNEDCFQKYFTSSVL

Transcript Sequence

Gene sequence data has not been registered.